SpCas9-NG self-targets the sgRNA sequence in plant genome editing
Dr. Pengcheng Wei’s team published the paper “SpCas9-NG self-targets the sgRNA sequence in plant genome editing ” at Nature Plants in 24 February 2020. The plasmid pHUC411-gcccc and pHUC411NG-gcccc of this article have been deposited on MolecularCloud.
Streptococcus pyogenes Cas9 (SpCas9)-NG recognizes NGN protospacer adjacent motifs and expands the scope of genome-editing tools.
In this study, Dr. Pengcheng Wei found that SpCas9-NG not only targeted the genome but also efficiently self-targeted the single-guide RNA sequence in transfer DNA in transgenic plants, potentially increasing off-target risk by generating new single-guide RNAs. They further showed that the self-target effect of SpCas9-NG could be greatly alleviated by using a modified single-guide RNA scaffold starting with a GCCCC sequence.
Plasmids from this article in MolecularCloud
Plasmid Name |
Description |
|
MC_0101108 |
SpCas9 binary
vector with a modified sgRNA scaffold starting with a GCCCC sequence |
|
MC_0101109 |
SpCas9-NG binary
vector with a modified sgRNA scaffold starting with a GCCCC sequence |
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